Bio-Scry Studio

Bio-Scry Studio

        
        BIO-SCRY
      STUDIOstudio.bioscry.app
        
          {{ dataSummary }}
        
        {{ tabsLabel }}
        
        {{ projectName }}{{ projectSummary }}
Drop a file, paste a sequence, or load a sample. Files are read by this tab and never sent anywhere.
Drop FASTA, FASTQ, GenBank or GFF
.fa .fasta .fq .fastq .gb .gbk .gff — gzipped (.gz) is fine
Paste a sequenceFASTA, FASTQ, GenBank or raw bases
Sample dataSynthetic test replicons — realistic coding density and GC skew, not real genomes.

                Also simulate reads for the assembler
              
                Fetch by accession
              
This is the one thing in Studio that uses the network. It downloads a public record from NCBI — nothing of yours is sent.
{{ fetchNote }}
In this project
                  
                      {{ grp.badge }}
                      
                      ACTIVE
                    
                    Read sets
                    
                          {{ rs.id }}
                          {{ rs.meta }}
                        
                    {{ readSummary }}
                  
              Projects
              
Files loaded
                
                    {{ fl.tag }}
                    
                      {{ fl.name }}
                      {{ fl.meta }}
                    
Read sets from this project are not loaded
{{ ps.id }} — {{ ps.meta }}

                Analyses run
                
NotesSaved with the project. What you did, and why — the part no result table records.
Export
                
{{ storageNote }}

                {{ gvHitLabel }}
                
                  {{ gvRulerLabels }}

                  {{ gvFeatLabels }}
                  
                    {{ f.title }}
                  
                    {{ f.title }}
                  
                  {{ gvTrackLabels }}

                      {{ gvSeqLabels }}
                    
                  {{ gvCircLabelEls }}
                Click the ring to move the window. The shaded wedge is what the linear view is showing.
Result tracks

                          {{ l.name }}
                          {{ l.count }}
                        
Tracks are drawn on both maps. Run a tool from a selection to add one.
Feature categories

                      {{ c.label }}
                      {{ c.count }}
                    
Assigned from product text by keyword, not by a COG search. Records with no product annotation land in Unclassified.

              {{ gvPickName }}
{{ gvPickMeta }}
{{ gvPickProduct }}
FIRST BASES
{{ gvPickSeq }}
TRANSLATION
{{ gvPickProt }}

            {{ gvSpanLabel }}
            {{ gvHint }}
          
              {{ gvSelLabel }}
              
              {{ gvNote }}
              
                {{ gvPanelTitle }}
                {{ gvPanelSub }}
                
{{ gvPanelTextLabel }}
{{ gvPanelText }}
{{ gvPanelEmpty }}

                      {{ c.label }}
                      
                        {{ c.text }}
                        
{{ gvPanelNote }}

Nothing loaded yetLoad a record and it opens here as an annotated map. Drop a file, paste a sequence, load a synthetic sample, or fetch a public record by accession.

            {{ toolCode }}
            {{ toolName }}
          
{{ toolBlurb }}

                {{ f.label }}
                
                {{ f.hint }}

            {{ inputNote }}
          
              {{ progressLabel }}
              {{ progressPct }}
            
                › {{ l }}
              
!{{ error }}
{{ emptyTitle }}{{ emptyBody }}
⚠{{ staleNote }}
✓{{ importNote }}

                  {{ b.title }}
                  
                    {{ b.sub }}
                  
                  {{ s.label }}
{{ s.value }}
{{ s.sub }}

                      {{ b.tickLabelEls }}
                      {{ b.mapLabelEls }}
                    
Rings, outside in

                            {{ lg.label }}
                          
Selected feature
{{ b.hoverName }}
{{ b.hoverMeta }}

                    {{ b.viewLabel }}
                  
                        {{ tk.label }}
                      
                          {{ bs.b }}
                        
{{ b.trackNote }}

              LADDER

                    {{ ld.label }}

{{ ln.name }}

FRAGMENTS

                          {{ fr.size }}{{ fr.pos }}
                        
                    {{ b.treeLeafLabelEls }}
                    
                    {{ b.scaleLabelEl }}
                  
                    {{ mr.id }}
                          
{{ b.msaNote }}

                        {{ lb }}
                        
                          {{ mrow.label }}
                          {{ mc.text }}
                          
                          {{ bi.label }}{{ bi.display }}
                        
                  {{ b.alnText }}
                
                            {{ col.label }}
                            
                              {{ cell.text }}
                              
{{ b.moreNote }}

                  {{ b.emptyText }}

              {{ b.note }}

      Bio-Scry Studio is for research and education. It is not a certified diagnostic device and must not be used as the sole basis for clinical or treatment decisions. Every result carries the method and, where a panel is involved, the panel version. Read the field guide